euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

154 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip880 chr1 56535813 56535813 - unknown germline . no 227 .
srip5998 chr1 192262261 192262261 - unknown germline . no 227 .
srip7217 chr1 237449858 237449858 . unknown germline . no 227 RYR2
srip7384 chr1 242311569 242311569 + unknown germline . no 227 PLD5
srip7629 chr10 5577530 5577530 . unknown germline . no 227 .
srip8454 chr10 25707693 25707693 - unknown germline . no 227 GPR158
srip9786 chr10 80529021 80529021 . unknown germline . no 227 .
srip10589 chr10 91717639 91717639 - unknown germline . no 227 .
srip13345 chr11 31603027 31603027 + unknown germline . no 227 ELP4
srip14855 chr11 48847329 48847329 + unknown germline . no 227 .
srip15373 chr11 58171843 58171843 + unknown germline . no 227 .
srip17179 chr11 94684368 94684368 + unknown germline . no 227 .
srip18058 chr11 110377886 110377886 - unknown germline . no 227 .
srip18225 chr11 112084613 112084613 + unknown germline . no 227 BCO2
srip19259 chr11 134305645 134305645 - unknown germline . no 227 .
srip19609 chr12 8105607 8105607 + unknown germline . no 227 .
srip19878 chr12 11219195 11219195 - unknown germline . no 227 PRH1-PRR4
srip20742 chr12 28226420 28226420 - unknown germline . no 227 .
srip21750 chr12 38134124 38134124 - unknown germline . no 227 .
srip22214 chr12 43256979 43256979 - unknown germline . no 227 .
srip24402 chr12 84955205 84955205 - unknown germline . no 227 .
srip24894 chr12 85506283 85506283 + unknown germline . no 227 LRRIQ1
srip25108 chr12 95808453 95808453 . unknown germline . no 227 .
srip25652 chr12 117814453 117814453 - unknown germline . no 227 .
srip26901 chr13 22489798 22489798 + unknown germline . no 227 .
srip27552 chr13 32939869 32939869 . unknown germline . no 227 BRCA2
srip29076 chr13 61462340 61462340 - unknown germline . no 227 .
srip29646 chr13 61734491 61734491 . unknown germline . no 227 .
srip30964 chr13 79259790 79259790 - unknown germline . no 227 .
srip31167 chr13 80219323 80219323 . unknown germline . no 227 .
srip31578 chr13 85871607 85871607 - unknown germline . no 227 .
srip31986 chr13 86340151 86340151 - unknown germline . no 227 .
srip33548 chr13 104296230 104296230 - unknown germline . no 227 .
srip34269 chr14 19000910 19000910 . unknown germline . no 227 .
srip35862 chr14 36674752 36674752 + unknown germline . no 227 .
srip37868 chr14 67419872 67419872 - unknown germline . no 227 GPHN
srip38388 chr14 84597736 84597736 + unknown germline . no 227 .
srip38618 chr14 86381803 86381803 - unknown germline . no 227 .
srip39521 chr15 34031845 34031845 - unknown germline . no 227 RYR3
srip39731 chr15 37707890 37707890 - unknown germline . no 227 .
srip40232 chr15 47507335 47507335 - unknown germline . no 227 SEMA6D
srip42526 chr15 83551628 83551628 - unknown germline . no 227 HOMER2
srip43271 chr15 100931152 100931152 . unknown germline . no 227 .
srip43422 chr15 101753511 101753511 . unknown germline . no 227 CHSY1
srip45505 chr16 33992437 33992437 . unknown germline . no 227 .
srip46000 chr16 70442814 70442814 + unknown germline . no 227 ST3GAL2
srip46518 chr17 4314989 4314989 - unknown germline . no 227 .
srip46533 chr17 6341639 6341639 - unknown germline . no 227 .
srip47013 chr17 25303543 25303543 . unknown germline . no 227 .
srip47697 chr17 32813627 32813627 + unknown germline . no 227 .
srip47893 chr17 34272157 34272157 + unknown germline . no 227 .
srip48161 chr17 64637284 64637284 + unknown germline . no 227 PRKCA
srip51827 chr18 74960069 74960069 - unknown germline . no 227 .
srip52345 chr19 29223828 29223828 . unknown germline . no 227 .
srip52451 chr19 46976526 46976526 . unknown germline . no 227 .
srip53454 chr2 23191008 23191008 - unknown germline . no 227 .
srip54254 chr2 36570251 36570251 - unknown germline . no 227 .
srip54640 chr2 42051410 42051410 + unknown germline . no 227 .
srip59768 chr2 168735521 168735521 - unknown germline . no 227 .
srip60785 chr2 191478707 191478707 - unknown germline . no 227 .
srip61126 chr2 199779905 199779905 + unknown germline . no 227 .
srip62478 chr2 234095319 234095319 - unknown germline . no 227 INPP5D
srip64015 chr20 25895497 25895497 - unknown germline . no 227 .
srip64051 chr20 25903867 25903867 - unknown germline . no 227 .
srip64138 chr20 29591583 29591583 . unknown germline . no 227 .
srip64766 chr20 41952105 41952105 - unknown germline . no 227 .
srip65355 chr21 10729833 10729833 + unknown germline . no 227 .
srip65536 chr21 14390186 14390186 - unknown germline . no 227 .
srip65842 chr21 19517303 19517303 - unknown germline . no 227 .
srip67240 chr22 19210904 19210904 + unknown germline . no 227 CLTCL1
srip67491 chr22 22486374 22486374 - unknown germline . no 227 IGL@
srip67855 chr22 22715595 22715595 + unknown germline . no 227 IGL@
srip67877 chr22 25059291 25059291 - unknown germline . no 227 .
srip68278 chr22 37127076 37127076 - unknown germline . no 227 .
srip68749 chr22 44324597 44324597 - unknown germline . no 227 PNPLA3
srip70734 chr3 24987866 24987866 - unknown germline . no 227 .
srip71079 chr3 26524455 26524455 - unknown germline . no 227 .
srip72083 chr3 44300750 44300750 - unknown germline . no 227 C3orf77
srip72703 chr3 55788574 55788574 + unknown germline . no 227 ERC2
srip73370 chr3 59852895 59852895 + unknown germline . no 227 FHIT
srip73935 chr3 75747827 75747827 + unknown germline . no 227 .
srip74450 chr3 80590171 80590171 - unknown germline . no 227 .
srip75284 chr3 84593281 84593281 - unknown germline . no 227 .
srip77257 chr3 123590719 123590719 + unknown germline . no 227 MYLK
srip78652 chr3 151148549 151148549 - unknown germline . no 227 MED12L
srip80240 chr3 175677977 175677977 - unknown germline . no 227 .
srip80351 chr3 176091325 176091325 + unknown germline . no 227 .
srip81482 chr3 186372132 186372132 + unknown germline . no 227 .
srip82996 chr4 18162684 18162684 - unknown germline . no 227 .
srip84708 chr4 47007787 47007787 - unknown germline . no 227 .
srip85121 chr4 53628483 53628483 + unknown germline . no 227 .
srip85380 chr4 57497060 57497060 - unknown germline . no 227 .
srip86343 chr4 66809074 66809074 - unknown germline . no 227 .
srip87894 chr4 86607953 86607953 + unknown germline . no 227 ARHGAP24
srip89012 chr4 104214678 104214678 + unknown germline . no 227 .
srip92802 chr4 138177329 138177329 + unknown germline . no 227 .
srip94047 chr4 165231734 165231734 - unknown germline . no 227 MARCH1
srip95382 chr4 190659701 190659701 + unknown germline . no 227 .
srip96070 chr5 8749521 8749521 + unknown germline . no 227 .
srip97010 chr5 23339374 23339374 - unknown germline . no 227 .
srip97227 chr5 26093147 26093147 + unknown germline . no 227 .
srip97735 chr5 33633341 33633341 - unknown germline . no 227 ADAMTS12
srip100738 chr5 89450775 89450775 + unknown germline . no 227 .
srip103404 chr5 128496357 128496357 . unknown germline . no 227 .
srip103598 chr5 135023720 135023720 . unknown germline . no 227 .
srip104864 chr5 154873935 154873935 - unknown germline . no 227 .
srip105247 chr5 155619871 155619871 + unknown germline . no 227 .
srip105820 chr5 164495153 164495153 - unknown germline . no 227 LOC100507193
srip106669 chr6 6742698 6742698 + unknown germline . no 227 .
srip109167 chr6 58481772 58481772 - unknown germline . no 227 .
srip109525 chr6 63368201 63368201 + unknown germline . no 227 .
srip109820 chr6 66570431 66570431 + unknown germline . no 227 .
srip111058 chr6 77980645 77980645 - unknown germline . no 227 .
srip112692 chr6 102283763 102283763 - unknown germline . no 227 GRIK2
srip113502 chr6 130848186 130848186 - unknown germline . no 227 .
srip114760 chr6 148195798 148195798 + unknown germline . no 227 .
srip115202 chr6 160521767 160521767 - unknown germline . no 227 IGF2R
srip115684 chr6 162181262 162181262 + unknown germline . no 227 PARK2
srip116298 chr7 17094708 17094708 + unknown germline . no 227 .
srip117459 chr7 52789459 52789459 + unknown germline . no 227 .
srip117623 chr7 53652509 53652509 - unknown germline . no 227 .
srip117865 chr7 57728181 57728181 . unknown germline . no 227 LOC100287663
srip117908 chr7 57942662 57942662 . unknown germline . no 227 .
srip117921 chr7 58019699 58019699 . unknown germline . no 227 .
srip118293 chr7 62492938 62492938 + unknown germline . no 227 .
srip118348 chr7 65960902 65960902 + unknown germline . no 227 .
srip119822 chr7 84901724 84901724 - unknown germline . no 227 .
srip120255 chr7 85044745 85044745 + unknown germline . no 227 .
srip121095 chr7 105741898 105741898 . unknown germline . no 227 SYPL1
srip121746 chr7 107829256 107829256 + unknown germline . no 227 NRCAM
srip122020 chr7 108325670 108325670 + unknown germline . no 227 .
srip122031 chr7 108657085 108657085 - unknown germline . no 227 .
srip122698 chr7 125342351 125342351 . unknown germline . no 227 .
srip123687 chr7 148852812 148852812 . unknown germline . no 227 ZNF398
srip124388 chr8 5829282 5829282 - unknown germline . no 227 .
srip125445 chr8 24926547 24926547 - unknown germline . no 227 .
srip125782 chr8 40433182 40433182 - unknown germline . no 227 ZMAT4
srip127448 chr8 72399228 72399228 - unknown germline . no 227 .
srip128745 chr8 106679011 106679011 + unknown germline . no 227 ZFPM2
srip131073 chr9 6290487 6290487 + unknown germline . no 227 .
srip131360 chr9 7741401 7741401 + unknown germline . no 227 .
srip131546 chr9 9236605 9236605 + unknown germline . no 227 PTPRD
srip133397 chr9 32463891 32463891 - unknown germline . no 227 DDX58
srip133621 chr9 34904794 34904794 - unknown germline . no 227 .
srip133957 chr9 72777413 72777413 - unknown germline . no 227 LOC100507244;MAMDC2
srip135874 chr9 118083873 118083873 - unknown germline . no 227 DEC1
srip137227 chrX 54917144 54917144 + unknown germline . no 227 .
srip137352 chrX 55264659 55264659 - unknown germline . no 227 .
srip137576 chrX 55585154 55585154 - unknown germline . no 227 .
srip138508 chrX 73486050 73486050 . unknown germline . no 227 FTX
srip140462 chrX 111557754 111557754 - unknown germline . no 227 ZCCHC16
srip141057 chrX 122664864 122664864 - unknown germline . no 227 .
srip141971 chrX 140515265 140515265 - unknown germline . no 227 .
srip142268 chrY 13458453 13458453 . unknown germline . no 227 .